moveHMM - Animal Movement Modelling using Hidden Markov Models
Provides tools for animal movement modelling using hidden Markov models. These include processing of tracking data, fitting hidden Markov models to movement data, visualization of data and fitted model, decoding of the state process, etc. <doi:10.1111/2041-210X.12578>.
Last updated 12 months ago
openblascpp
8.63 score 38 stars 112 scripts 729 downloadshmmTMB - Fit Hidden Markov Models using Template Model Builder
Fitting hidden Markov models using automatic differentiation and Laplace approximation, allowing for fast inference and flexible covariate effects (including random effects and smoothing splines) on model parameters. The package is described by Michelot (2022) <arXiv:2211.14139>.
Last updated 27 days ago
cpp
6.57 score 53 stars 64 scripts 252 downloads