Package: hmmTMB 1.0.2
hmmTMB: Fit Hidden Markov Models using Template Model Builder
Fitting hidden Markov models using automatic differentiation and Laplace approximation, allowing for fast inference and flexible covariate effects (including random effects and smoothing splines) on model parameters. The package is described by Michelot (2022) <arxiv:2211.14139>.
Authors:
hmmTMB_1.0.2.tar.gz
hmmTMB_1.0.2.zip(r-4.5)hmmTMB_1.0.2.zip(r-4.4)hmmTMB_1.0.2.zip(r-4.3)
hmmTMB_1.0.2.tgz(r-4.4-x86_64)hmmTMB_1.0.2.tgz(r-4.4-arm64)hmmTMB_1.0.2.tgz(r-4.3-x86_64)hmmTMB_1.0.2.tgz(r-4.3-arm64)
hmmTMB_1.0.2.tar.gz(r-4.5-noble)hmmTMB_1.0.2.tar.gz(r-4.4-noble)
hmmTMB.pdf |hmmTMB.html✨
hmmTMB/json (API)
| # Install 'hmmTMB' in R: |
| install.packages('hmmTMB', repos = c('https://theomichelot.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/theomichelot/hmmtmb/issues
Last updated 5 days agofrom:62e01f3b33. Checks:ERROR: 1 WARNING: 8. Indexed: yes.
| Target | Result | Date |
|---|---|---|
| Doc / Vignettes | FAIL | Nov 14 2024 |
| R-4.5-win-x86_64 | WARNING | Nov 14 2024 |
| R-4.5-linux-x86_64 | WARNING | Nov 14 2024 |
| R-4.4-win-x86_64 | WARNING | Nov 14 2024 |
| R-4.4-mac-x86_64 | WARNING | Nov 14 2024 |
| R-4.4-mac-aarch64 | WARNING | Nov 14 2024 |
| R-4.3-win-x86_64 | WARNING | Nov 14 2024 |
| R-4.3-mac-x86_64 | WARNING | Nov 14 2024 |
| R-4.3-mac-aarch64 | WARNING | Nov 14 2024 |
Exports:as_character_formulaDistHMMinvmlogitis_whole_numberlogsumexpmake_formulasMarkovChainmlogitmvnorm_invlinkmvnorm_linkObservationprec_to_covquad_pos_solvestrip_comments
Dependencies:abindbackportsBHbootcallrcheckmateCircStatsclicolorspacedescdistributionalfansifarvergenericsggplot2gluegridExtragtableinlineisobandlabelinglatticelifecycleloomagrittrMASSMatrixmatrixStatsmgcvmunsellnlmenumDerivpillarpkgbuildpkgconfigposteriorprocessxpsQuickJSRR6RColorBrewerRcppRcppEigenRcppParallelrlangrstanscalesStanHeadersstringistringrtensorAtibbleTMBtmbstanutf8vctrsviridisLitewithr
